
Understanding the Immune System
What is the Immune System? <LI>Self and Nonself <
The key to a healthy immune system is its remarkable ability to distinguish between the body’s own cells, recognized as “self,” and foreign cells, or “nonself.” The body’s immune defenses normally coexist peacefully with cells that carry distinctive “self” marker molecules. But when immune defenders encounter foreign cells or organisms carrying markers that say “nonself,” they quickly launch an attack.
Anything that can trigger this immune response is called an antigen. An antigen can be a microbe such as a virus, or a part of a microbe such as a molecule. Tissues or cells from another person (except an identical twin) also carry nonself markers and act as foreign antigens. This explains why tissue transplants may be rejected.
In abnormal situations, the immune system can mistake self for nonself and launch an attack against the body’s own cells or tissues. The result is called an autoimmune disease. Some forms of arthritis and diabetes are autoimmune diseases.
In other cases, the immune system responds to a seemingly harmless foreign substance such as ragweed pollen. The result is allergy, and this kind of antigen is called an allergen.
Antigens carry marker molecules that identify them as foreign. Credit: NIAIDLI>The Structure of the Immune System
The organs of the immune system are positioned throughout the body. They are called lymphoid organs because they are home to lymphocytes, small white bloodcells that are the key players in the immune system.
Bone marrow, the soft tissue in the hollow center of bones, is the ultimate source of all blood cells, including lymphocytes. The thymus is a lymphoid organ that lies behind the breastbone.
Lymphocytes known as T lymphocytes or T cells (“T” stands for “thymus”) mature in the thymus and then migrate to other tissues. B lymphocytes, also known as B cells, become activated and mature into plasma cells, which make and release antibodies.
Lymph nodes, which are located in many parts of the body, are lymphoid tissues that contain numerous specialized structures.
- T cells from the thymus concentrate in the paracortex.
- B cells develop in and around the germinal centers.
- Plasma cells occur in the medulla.
Lymphocytes can travel throughout the body using the blood vessels. The cells can also travel through a system of lymphatic vessels that closely parallels the body’s veins and arteries.
Cells and fluids are exchanged between blood and lymphatic vessels, enabling the lymphatic system to monitor the body for invading microbes. The lymphatic vessels carry lymph, a clear fluid that bathes the body’s tissues.
Small, bean-shaped lymph nodes are laced along the lymphatic vessels, with clusters in the neck, armpits, abdomen, and groin. Each lymph node contains specialized compartments where immune cells congregate, and where they can encounter antigens.
Immune cells, microbes, and foreign antigens enter the lymph nodes via incoming lymphatic vessels or the lymph nodes’ tiny blood vessels. All lymphocytes exit lymph nodes through outgoing lymphatic vessels. Once in the bloodstream, lymphocytes are transported to tissues throughout the body. They patrol everywhere for foreign antigens, then gradually drift back into the lymphatic system to begin the cycle all over again.
The spleen is a flattened organ at the upper left of the abdomen. Like the lymph nodes, the spleen contains specialized compartments where immune cells gather and work. The spleen serves as a meeting ground where immune defenses confront antigens.
Other clumps of lymphoid tissue are found in many parts of the body, especially in the linings of the digestive tract, airways, and lungs—territories that serve as gateways to the body. These tissues include the tonsils, adenoids, and appendix.
<LI>Immune Cells and Their Products <
The immune system stockpiles a huge arsenal of cells, not only lymphocytes but also cell-devouring phagocytes and their relatives. Some immune cells take on all intruders, whereas others are trained on highly specific targets. To work effectively, most immune cells need the cooperation of their comrades. Sometimes immune cells communicate by direct physical contact, and sometimes they communicate releasing chemical messengers.
An antibody is made up of two heavy chains and two light chains. The variable region, which differs from one antibody to the next, allows an antibody to recognize its matching antigen. Credit: NIAID.The immune system stores just a few of each kind of the different cells needed to recognize millions of possible enemies. When an antigen first appears, the few immune cells that can respond to it multiply into a full-scale army of cells. After their job is done, the immune cells fade away, leaving sentries behind to watch for future attacks.All immune cells begin as immature stem cells in the bone marrow. They respond to different cytokines and other chemical signals to grow into specific immune cell types, such as T cells, B cells, or phagocytes. Because stem cells have not yet committed to a particular future, their use presents an interesting possibility for treating some immune system disorders. Researchers currently are investigating if a person’s own stem cells can be used to regenerate damaged immune responses in autoimmune diseases and in immune deficiency disorders, such as HIV infection.
LI>Immunity: Natural and Acquired
Long ago, physicians realized that people who had recovered from the plague would never get it again—they had acquired immunity. This is because some of the activated T and B cells had become memory cells. Memory cells ensure that the next time a person meets up with the same antigen, the immune system is already set to demolish it.
Immunity can be strong or weak, short-lived or long-lasting, depending on the type of antigen it encounters, the amount of antigen, and the route by which the antigen enters the body. Immunity can also be influenced by inherited genes. When faced with the same antigen, some individuals will respond forcefully, others feebly, and some not at all.

Antigen, Natural, and Acquired Immunity. Credit: NIAID.
An immune response can be sparked not only by infection but also by immunization with vaccines. Some vaccines contain microorganisms—or parts of microorganisms— that have been treated so they can provoke an immune response but not full-blown disease.
Immunity can also be transferred from one individual to another by injections of serum rich in antibodies against a particular microbe (antiserum). For example, antiserum is sometimes given to protect travelers to countries where hepatitis A is widespread. The antiserum induces passive immunity against the hepatitis A virus. Passive immunity typically lasts only a few weeks or months.
Infants are born with weak immune responses but are protected for the first few months of life by antibodies they receive from their mothers before birth. Babies who are nursed can also receive some antibodies from breast milk that help to protect their digestive tracts.
Immune Tolerance
Immune tolerance is the tendency of T or B lymphocytes to ignore the body’s own tissues. Maintaining tolerance is important because it prevents the immune system from attacking its fellow cells. Scientists are hard at work trying to understand how the immune system knows when to respond and when to ignore an antigen.
Tolerance occurs in at least two ways—central tolerance and peripheral tolerance. Central tolerance occurs during lymphocyte development. Very early in each immune cell’s life, it is exposed to many of the self molecules in the body. If it encounters these molecules before it has fully matured, the encounter activates an internal self-destruct pathway, and the immune cell dies. This process, called clonal deletion, helps ensure that “self-reactive” T cells and B cells, those that could develop the ability to destroy the body’s own cells, do not mature and attack healthy tissues.
Because maturing lymphocytes do not encounter every molecule in the body, they must also learn to ignore mature cells and tissues. In peripheral tolerance, circulating lymphocytes might recognize a self molecule but cannot respond because some of the chemical signals required to activate the T or B cell are absent. So-called clonal anergy, therefore, keeps potentially harmful lymphocytes switched off. Peripheral tolerance may also be imposed by a special class of regulatory T cells that inhibits helper or cytotoxic T-cell activation by self antigens.
Vaccines
For many years, healthcare providers have used vaccination to help the body’s immune system prepare for future attacks. Vaccines consist of killed or modified microbes, parts of microbes, or microbial DNA that trick the body into thinking an infection has occurred.
A vaccinated person’s immune system attacks the harmless vaccine and prepares for invasions against the kind of microbe the vaccine contained. In this way, the person becomes immunized against the microbe. Vaccination remains one of the best ways to prevent infectious diseases, and vaccines have an excellent safety record. Previously devastating diseases such as smallpox, polio, and whooping cough (pertussis) have been greatly controlled or eliminated through worldwide vaccination programs
Research
Although scientists have learned much about the immune system, they continue to study how the body launches attacks that destroy invading microbes, infected cells, and tumors while ignoring healthy tissues. New technologies for identifying individual immune cells are now allowing scientists to determine quickly which targets are triggering an immune response. Improvements in microscopy are permitting the first-ever observations of living B cells, T cells, and other cells as they interact within lymph nodes and other body tissues.
In addition, scientists are rapidly unraveling the genetic blueprints that direct the human immune response, as well as those that dictate the biology of bacteria, viruses, and parasites. The combination of new technology and expanded genetic information will no doubt reveal even more about how the body protects itself from disease.